2022

Weitere Veröffentlichungen finden Sie unter den einzelnen Arbeitsgruppen und in KOPS / Further publications can be found under the individual working groups and in KOPS

Morphological defences and defence-cost-trade-offs in Daphnia in response to two co-occurring invertebrate predators.
P Octorina, A Böhm, D Martin-Creuzburg und D Straile (2022) Freshwater Biology 67: 883-892

Can young‐of‐the‐year invasive fish keep up with young‐of‐the‐year native fish? A comparison of feeding rates between invasive sticklebacks and whitefish.
Ž Ogorelec ,LG Rudstam und D Straile (2022) Ecology & Evolution 12: e4886

Strong Selection and High Mutation Supply Characterize Experimental Chlorovirus Evolution. Virus Evolution
C Retel, V Kowallik, L Becks,  and PGD Feulner (2022) https://doi.org/10.1093/ve/veac003

Catchment scale deforestation increases the uniqueness of subtropical stream communities.
F Schneck, LM Bini, AS Melo, DK Petsch, VS Saito, S Wengrat und T Siqueira (202) Oecologia 199: 671-683

Nutritional constraints on zooplankton.
Straile D & D Martin-Creuzburg (2022) Reference Module in Earth Systems and Environmental Sciences, 2nd edition, Vol. 2: 184-195

Contrasting Microbiome Dynamics of Putative Denitrifying Bacteria in Two Octocoral Species Exposed to Dissolved Organic Carbon (DOC) and Warming
N Xiang, C Hassenrück, C Pogoreutz, N Rädecker, SM Simancas-Giraldo, CR Voolstra, C Wild, A Gärdes (2022) DOI: https://doi.org/10.1128/AEM.01886-21 

Biogeochemical Distinctiveness of Peatland Ponds, Thermokarst Waterbodies, and Lakes.
J Arsenault,  J Talbot, LE Brown, J Holden, K Martinez-Cruz, A Sepulveda-Jauregui, GT Swindles, M Wauthy, JF Lapierre (2022). Geophysical Research Letters. doi: 10.1029/2021GL097492

Clockwise hysteresis of diatoms in response to nutrient dynamics during eutrophication and recovery.
M Milan, N Albrecht, F Peeters, S Wengrat, M Wessels, and D Straile. (2022). Limnol. Oceanogr. doi: 10.1002/lno.12190.

Erosionsschutzmaßnahmen in Unterwasserdenkmälern am Bodensee-Obersee: Auswirkungen auf die Makrophytenvegetation und Naturschutzverträglichkeit.
W Ostendorp and K van de Weyer. (2022). Mitt. Bad. Landesverein Naturkunde u. Naturschutz, 25: 33-5.

Methane and carbon dioxide cycles in lakes of the King George Island, maritime Antarctica.
F Thalasso,  A Sepulveda-Jauregui, L Cabrol, C Lavergne, N Olgun, K Martinez-Cruz, P Aguilar-Munoz, N Calle, A Mansilla, MS Astorga-Espana (2022). Science of the Total Environment. doi: 10.1016/j.scitotenv.2022.157485

Coupled carbon and nitrogen cycling regulates the cnidarian-algal symbiosis
N Rädecker, S Escrig, JE Spangenberg, CR Voolstra, A Meibom - bioRxiv, 2022.12. 06.519281

Red Sea Atlas of Coral-Associated Bacteria Highlights Common Microbiome Members and Their Distribution across Environmental Gradients—A Systematic Review
N Delgadillo-Ordoñez, I Raimundo, AR Barno, EO Osman, H Villela, M Bennett-Smith, CR Voolstra, F Benzoni, RS Peixoto - Microorganisms 10 (12), 2340

Deoxygenation lowers the thermal threshold of coral bleaching
R Alderdice, G Perna, A Cárdenas, BCC Hume, M Wolf, M Kühl, M Pernice, DJ Suggett, CR Voolstra - Scientific Reports 12 (1), 18273

Presence of algal symbionts affects denitrifying bacterial communities in the sea anemone Aiptasia coral model
N Xiang, N Rädecker, C Pogoreutz, A Cárdenas, A Meibom, C Wild, A Gärdes, CR Voolstra - ISME Communications 2 (1), 105

Data for "Excess labile carbon promotes the expression of virulence factors in coral reef bacterioplankton"
A Cardénas, CR Voolstra - [Data set]. Zenodo. doi.org/10.5281/zenodo.7139560

Millennia‐old coral holobiont DNA provides insight into future adaptive trajectories
CB Scott, A Cárdenas, M Mah, VM Narasimhan, N Rohland, LT Toth, CR Voolstra, D Reich, MV Matz - Molecular Ecology 31 (19), 4979-4990

Greater functional diversity and redundancy of coral endolithic microbiomes align with lower coral bleaching susceptibility
A Cárdenas, JB Raina, C Pogoreutz, N Rädecker, J Bougoure, P Guagliardo, M Pernice, CR Voolstra  - The ISME journal 16 (10), 2406-2420

Methods and strategies to uncover coral-associated microbial dark matter
J Schultz, F Modolon, AS Rosado, CR Voolstra, M Sweet, RS Peixoto - Msystems 7 (4), e00367-22

Coral holobiont cues prime Endozoicomonas for a symbiotic lifestyle
C Pogoreutz, CA Oakley, N Rädecker, A Cárdenas, G Perna, N Xiang, L Peng, SK Davy, DK Ngugi, CR Voolstra - The ISME Journal 16 (8), 1883-1895

Harnessing the microbiome to prevent global biodiversity loss
RS Peixoto, CR Voolstra, M Sweet, CM Duarte, S Carvalho, H Villela, JE Lunshof, L Gram, DC Woodhams, J Walter, A Roik, U Hentschel, R Vega Thurber, B Daisley, B Ushijima, D Daffonchio, R Costa, T Keller-Costa, JS Bowman, AS Rosado, G Reid, CE Mason, JB Walke, T Thomas, G Berg - Nature Microbiology, 1-10

Coral‐bleaching responses to climate change across biological scales
R Van Woesik, T Shlesinger, AG Grottoli, RJ Toonen, R Vega Thurber, ME Warner, AM Hulver, L Chapron, RH McLachlan, R Albright, E Crandall, TM DeCarlo, MK Donovan, J Eirin‐Lopez, HB Harrison, SF Heron, D Huang, A Humanes, T Krueger, JS Madin, D Manzello, LC McManus, M Matz, EM Muller, M Rodriguez‐Lanetty, M Vega‐Rodriguez, CR Voolstra, J Zaneveld - Global change biology 28 (14), 4229-4250

A novel bacterial speciation process observed in a symbiotic marine population
X Wang, K Uematsu, A O’Rourke, T Akita, K Kimura, Y Tomaru, CR Voolstra, H Innan, H Luo - bioRxiv, 2022.06. 15.496264

The 2014-17 global coral bleaching event: The most severe and widespread coral reef destruction
CM Eakin, D Devotta, SF Heron, S Connolly, G Liu, E Geiger, JDL Cour, A Gomez, W Skirving, AH Baird, N Cantin, C Couch, S Donner, J Gilmour, M Gonzalez-Rivero, M Gudka, H Harrison, G Hodgson, O Hoegh-Guldberg, AS Hoey, M Hoogenboom, TP Hughes, M Johnson, J Kerry, J Mihaly, A Muñiz-Castillo, D Obura, M Pratchett, A Rivera-Sosa, C Ross, J Stein, A Thompson, G Torda, TS Viehman, C Walter, SK Wilson, BM, B Spady, N Dyer, T Adam, M Alidoostsalimi, P Alidoostsalimi, Lo Alvarez-Filip, M Álvarez-Noriega, K Bahr, P Barnes, JB Sandoval, J Baum, A Bauman, M Beger, K Berry, P Bessell-Browne, L Bigot, V Bonito, O Brodnicke, D Burdick, D Burkepile, A Burt, JA Burt, I Butler, J Caldwell, Y Chancerelle, CA Chen, K-L Cherh, M Childress, D Coken, G Coward, MJ Crabbe, T Dallison, S Dalton, TM De Carlo, C Drury, I Drysdale, C Edwards, L Eggertsen, E Elma, R Ennis, R Evans, G Eyal, D Fenner, B Figueroa-Zavala, J Fisch, MD Fox, E Gadoutsis, A Gilbert, A Halford, T Heintz, J Hewlett, J-P A Hobbs, W Hoot, P Houk, L Johnston, M Johnston, H Kayanne, E Kennedy, RKP Kikuchi, U Kloiber, H Koike, L Kramer, C-Y Kuo, J Lang, A Leadbeater, Z Leão, J Lee, C Lewis, D Lirman, G Longo, C MacDonald, S Mangubhai, I da Silva, C Mason-Parker, V McDonough, M McField, T Mello, C Miternique Agathe, S Moldzio, A Monroe, M Montefalcone, K Moses, P Ghavam Mostafavi, R Moura, C Munasinghe, T Nakamura, J-B Nicet, M Nuttall, M Oliveira, H Oxenford, JM Pandolfi, V Patankar, D Perez, N Perera, D Prabuning, W Precht, K Diraviya Raj, JD Reimer, L Richardson, R Rotjan, N Ryan, R Salm, SA Sandin, S Schopmeyer, M Shokri, J Smith, K Smith, SR Smith, T Smith, B Sommer, M Soto, H Sykes, K Tagarino - Research Square Platform LLC

Widespread oxyregulation in tropical corals under hypoxia
DJ Hughes, J Alexander, G Cobbs, M Kühl, C Cooney, M Pernice, D Varkey, CR Voolstra, DJ Suggett - Marine Pollution Bulletin 179, 113722

Disparate Inventories of hypoxia gene sets across corals align with inferred environmental resilience
R Alderdice, BCC Hume, M Kühl, M Pernice, DJ Suggett, CR Voolstra - Frontiers in Marine Science 9, 2296-7745

DNA preservation & DNA extraction protocol for field collection of coral samples suitable for host-, marker gene-, and metagenomics-based sequencing approaches
CR Voolstra, G Perna, A Cárdenas, C Luigi, MS Dörr, A Fiesinger - [Protocol]. Zenodo. doi.org/10.5281/zenodo.6523532

TARA Pacific Bleaching Prevalence of Sampling Sites (Islands)
CR Voolstra, BCC Hume, K Pikaar, G Bourdin, S Pesant, J Poulain, C Belser, H-J Ruscheweyh, G Salazar, E Armstrong, C Moulin, E Boissin, G Iwankow, S Romac, S Agostini, B Banaigs, C de Vargas, E Douville, P Furla, P E Galand, E Gilson, S Reynaud, O Thomas, R Troublé, R Vega Thurber, D Zoccola, S Planes, D Allemand, S Sunagawa, D Forcioli, P Wincker, F Lombard - [Data set]. Zenodo. doi.org/10.5281/zenodo.6511406

RNA preservation & RNA extraction protocol suitable for field collection of coral samples
CR Voolstra, G Perna - [Protocol]. Zenodo. doi.org/10.5281/zenodo.6492452

High light quantity suppresses locomotion in symbiotic Aiptasia
NF Strumpen, N Rädecker, C Pogoreutz, A Meibom, CR Voolstra - Symbiosis 86 (3), 293-304

Heat stress reduces the contribution of diazotrophs to coral holobiont nitrogen cycling
N Rädecker, C Pogoreutz, HM Gegner, A Cárdenas, G Perna, L Geißler, F Roth, J Bougoure, P Guagliardo, U Struck, C Wild, M Pernice, J-B Raina, A Meibom, CR Voolstra - The ISME Journal 16 (4), 1110-1118

Data from 'Disparate inventories of hypoxia gene sets across corals align with inferred environmental resilience'
R Alderdice, BCC Hume, M Kuhl, M Pernice, DJ Suggett, CR Voolstra - [Data set]. Zenodo. doi.org/10.5281/zenodo.6396671

Empirically derived thermal thresholds of four coral species along the Red Sea using a portable and standardized experimental approach
NR Evensen, CR Voolstra, M Fine, G Perna, C Buitrago-López, A Cárdenas, G Banc-Prandi, K Rowe, DJ Barshis  - Coral Reefs, doi.org/10.1007/s00338-022-02233

TARA Pacific CDIV cnidarian host taxonomic annotation release version 1_1
BCC Hume, Y Kitano, H Fukami, S Agostini, J Poulain, S Pesant, C Belser, H-J Ruscheweyh, DA Paz Garcia, E Armstrong, Q Clayssen, N Henry, G Klinges, R McMinds, L Paoli, C Pogoreutz, G Salazar, M Ziegler, C Moulin, E Boissin, G Bourdin, G Iwankow, S Romac, B Banaigs, E Boss, C Bowler, C de Vargas, E Douville, J Michel Flores, P Furla, PE Galand, E Gilson, F Lombard, S Reynaud, O Thomas, R Troublé, R Vega Thurber, D Zoccola, S Planes, D Allemand, S Sunagawa, P Wincker, D Forcioli, CR. Voolstra - [Data set]. Zenodo. doi.org/10.5281/zenodo.6327048

Tara Pacific CDIV ITS2 Symbiodiniaceae data release
BCC Hume, J Poulain, S Pesant, C Belser, HJ Ruscheweyh, E Armstrong, Q Clayssen, N Henry, G Klinges, R McMinds, L Paoli, C Pogoreutz, G Salazar, M Ziegler, C Moulin, E Boissin, G Bourdin, G Iwankow, S Romac, S Agostini, B Banaigs, E Boss, C Bowler, C de Vargas, E Douville, J. Michel Flores, P Furla, PE Galand, E Gilson, F Lombard, S Reynaud, O Thomas, R Troublé, R Vega Thurber, D Zoccola, S Planes, D Allemand, S Sunagawa, D Forcioli, P Wincker, CR Voolstra  - [Data set]. Zenodo. doi.org/10.5281/zenodo.6322848

Urbanization comprehensively impairs biological rhythms in coral holobionts
Y Rosenberg, N Simon‐Blecher, M Lalzar, R Yam, A Shemesh, S Alon, G Perna, A Cárdenas, CR Voolstra, DJ Miller, OLevy - Global Change Biology 28 (10), 3349-3364

Emergence of distinct syntenic density regimes is associated with early metazoan genomic transitions
NSM Robert, F Sarigol, B Zimmermann, A Meyer, CR Voolstra, O Simakov - BMC Genomics 23 (1), 1-14

Contrasting microbiome dynamics of putative denitrifying bacteria in two octocoral species exposed to dissolved organic carbon (DOC) and warming
N Xiang, C Hassenrück, C Pogoreutz, N Rädecker, SM Simancas-Giraldo, CR Voolstra, C Wild, A Gärdes - Applied and Environmental Microbiology 88 (2), e01886-21

From genome wide SNPs to genomic islands of differentiation: the quest for species diagnostic markers in two scleractinian corals, Pocillopora and Porites
R Deshuraud, A Ottaviani, J Poulain, M Lepretre, O Beluche, E Mahieu, S Lebled, C Belser, A Rouan, C Moulin, E Boissin, G Bourdin, G Iwankow, S Romac, S Agostini, B Banaigs, E Boss, C Bowler, C de Vargas, E Douville, M Flores, P Furla, P Galand, F Lombard, S Pesant, S Reynaud, MB Sullivan, S Sunagawa, O Thomas, R Troublé, R Vega Thurber, CR Voolstra, P Wincker, D Zoccola, S Planes, D Allemand, E Gilson, D Forcioli - bioRxiv, 2022.10. 21.513203